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Cluster: CGMR093085_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_52255 k141_52255_12 11885 12910 - GT2
CAZyme k141_52255 k141_52255_13 13060 14088 - GT2
pfam k141_52255 k141_52255_14 14108 15145 - Acyl_transf_3
CAZyme k141_52255 k141_52255_15 15190 16194 - GT2
CAZyme k141_52255 k141_52255_16 16217 17071 - GT2
NULL(UNKNOWN) k141_52255 k141_52255_17 17064 17615 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_52255 k141_52255_18 17651 19231 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_52255 k141_52255_19 19254 20435 - GT4
CAZyme k141_52255 k141_52255_20 20432 21568 - GT4
CAZyme k141_52255 k141_52255_21 21565 22707 - GT4
pfam k141_52255 k141_52255_22 22694 23905 - Wzy_C
NULL(UNKNOWN) k141_52255 k141_52255_23 23943 24905 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_52255 k141_52255_24 24902 26074 - GT4
CAZyme k141_52255 k141_52255_25 26115 27233 - GT4
CAZyme k141_52255 k141_52255_26 27270 28457 - GT4
CAZyme k141_52255 k141_52255_27 28454 29608 - GT4
CAZyme k141_52255 k141_52255_28 29659 30435 - GT2
pfam k141_52255 k141_52255_29 30455 31060 - CpsB_CapC
TC k141_52255 k141_52255_30 31128 33494 - 8.A.3.1.2
TC k141_52255 k141_52255_31 33568 34350 - 1.B.18.3.2
TC k141_52255 k141_52255_32 34379 35041 - 9.B.18.1.3
TC k141_52255 k141_52255_33 35578 38100 + 3.A.12.1.1
Gene ID: k141_52255_12
Type: CAZyme
Location: 11885 - 12910 (-)
Gene ID: k141_52255_13
Type: CAZyme
Location: 13060 - 14088 (-)
Gene ID: k141_52255_14
Type: pfam
Location: 14108 - 15145 (-)
Gene ID: k141_52255_15
Type: CAZyme
Location: 15190 - 16194 (-)
Gene ID: k141_52255_16
Type: CAZyme
Location: 16217 - 17071 (-)
Gene ID: k141_52255_17
Type:
Location: 17064 - 17615 (-)
Gene ID: k141_52255_18
Type:
Location: 17651 - 19231 (-)
Gene ID: k141_52255_19
Type: CAZyme
Location: 19254 - 20435 (-)
Gene ID: k141_52255_20
Type: CAZyme
Location: 20432 - 21568 (-)
Gene ID: k141_52255_21
Type: CAZyme
Location: 21565 - 22707 (-)
Gene ID: k141_52255_22
Type: pfam
Location: 22694 - 23905 (-)
Gene ID: k141_52255_23
Type:
Location: 23943 - 24905 (-)
Gene ID: k141_52255_24
Type: CAZyme
Location: 24902 - 26074 (-)
Gene ID: k141_52255_25
Type: CAZyme
Location: 26115 - 27233 (-)
Gene ID: k141_52255_26
Type: CAZyme
Location: 27270 - 28457 (-)
Gene ID: k141_52255_27
Type: CAZyme
Location: 28454 - 29608 (-)
Gene ID: k141_52255_28
Type: CAZyme
Location: 29659 - 30435 (-)
Gene ID: k141_52255_29
Type: pfam
Location: 30455 - 31060 (-)
Gene ID: k141_52255_30
Type: TC
Location: 31128 - 33494 (-)
Gene ID: k141_52255_31
Type: TC
Location: 33568 - 34350 (-)
Gene ID: k141_52255_32
Type: TC
Location: 34379 - 35041 (-)
Gene ID: k141_52255_33
Type: TC
Location: 35578 - 38100 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_52255_16 vegetarian > vegan 1.15196 0.00855

🧭 Explore Read Mapping of CGC

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