Cluster: CGMR093085_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR093085
- CGC Family ID: CGCFAM_01200
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_117130 | k141_117130_50 | 51729 | 52487 | + | 3.A.1.25.5 |
| pfam | k141_117130 | k141_117130_51 | 52512 | 53948 | + | SUFBD_core | SufBD_N |
| pfam | k141_117130 | k141_117130_52 | 53957 | 55213 | + | SUFBD_core |
| CAZyme | k141_117130 | k141_117130_53 | 55612 | 56574 | + | GT2 |
Gene ID: k141_117130_50
Type: TC
Location: 51729 - 52487 (+)
Type: TC
Location: 51729 - 52487 (+)
Gene ID: k141_117130_51
Type: pfam
Location: 52512 - 53948 (+)
Type: pfam
Location: 52512 - 53948 (+)
Gene ID: k141_117130_52
Type: pfam
Location: 53957 - 55213 (+)
Type: pfam
Location: 53957 - 55213 (+)
Gene ID: k141_117130_53
Type: CAZyme
Location: 55612 - 56574 (+)
Type: CAZyme
Location: 55612 - 56574 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.