Cluster: CGMR093085_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR093085
- CGC Family ID: CGCFAM_02093
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_63862 | k141_63862_25 | 26944 | 29937 | + | GH84 |
| NULL(UNKNOWN) | k141_63862 | k141_63862_26 | 30051 | 30695 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | k141_63862 | k141_63862_27 | 30919 | 31983 | + | SBP_bac_3 |
| TC | k141_63862 | k141_63862_28 | 31980 | 32768 | + | 3.A.1.16.1 |
| TC | k141_63862 | k141_63862_29 | 32765 | 33556 | + | 3.A.1.16.4 |
Gene ID: k141_63862_25
Type: CAZyme
Location: 26944 - 29937 (+)
Type: CAZyme
Location: 26944 - 29937 (+)
Gene ID: k141_63862_26
Type:
Location: 30051 - 30695 (-)
Type:
Location: 30051 - 30695 (-)
Gene ID: k141_63862_27
Type: STP
Location: 30919 - 31983 (+)
Type: STP
Location: 30919 - 31983 (+)
Gene ID: k141_63862_28
Type: TC
Location: 31980 - 32768 (+)
Type: TC
Location: 31980 - 32768 (+)
Gene ID: k141_63862_29
Type: TC
Location: 32765 - 33556 (+)
Type: TC
Location: 32765 - 33556 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_63862_29 | vegetarian > vegan | 1.11634 | 0.00855 |