Cluster: CGMR093085_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR093085
- CGC Family ID: CGCFAM_02036
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_100294 | k141_100294_33 | 34877 | 35992 | + | 3.A.11.1.3 |
| pfam | k141_100294 | k141_100294_34 | 36273 | 37433 | + | EF-hand_5 | EF-hand_5 | EF-hand_5 | EF-hand_5 | EF-hand_7 | EF-hand_7 |
| TC | k141_100294 | k141_100294_35 | 37743 | 40169 | - | 2.A.6.4.3 |
| CAZyme | k141_100294 | k141_100294_36 | 40372 | 41340 | - | CE4 |
Gene ID: k141_100294_33
Type: TC
Location: 34877 - 35992 (+)
Type: TC
Location: 34877 - 35992 (+)
Gene ID: k141_100294_34
Type: pfam
Location: 36273 - 37433 (+)
Type: pfam
Location: 36273 - 37433 (+)
Gene ID: k141_100294_35
Type: TC
Location: 37743 - 40169 (-)
Type: TC
Location: 37743 - 40169 (-)
Gene ID: k141_100294_36
Type: CAZyme
Location: 40372 - 41340 (-)
Type: CAZyme
Location: 40372 - 41340 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.