Cluster: CGMR093085_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR093085
- CGC Family ID: CGCFAM_08978
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_10185 | k141_10185_53 | 63780 | 65429 | - | GH20 |
| TC | k141_10185 | k141_10185_54 | 65554 | 67056 | - | 3.A.5.1.1 |
| pfam | k141_10185 | k141_10185_55 | 67105 | 68040 | + | NadA |
| pfam | k141_10185 | k141_10185_56 | 68058 | 69056 | + | Methyltransf_28 |
| TC | k141_10185 | k141_10185_57 | 69547 | 70128 | + | 3.D.1.3.1 |
| TC | k141_10185 | k141_10185_58 | 70184 | 70768 | + | 3.D.1.5.1 |
Gene ID: k141_10185_53
Type: CAZyme
Location: 63780 - 65429 (-)
Type: CAZyme
Location: 63780 - 65429 (-)
Gene ID: k141_10185_54
Type: TC
Location: 65554 - 67056 (-)
Type: TC
Location: 65554 - 67056 (-)
Gene ID: k141_10185_55
Type: pfam
Location: 67105 - 68040 (+)
Type: pfam
Location: 67105 - 68040 (+)
Gene ID: k141_10185_56
Type: pfam
Location: 68058 - 69056 (+)
Type: pfam
Location: 68058 - 69056 (+)
Gene ID: k141_10185_57
Type: TC
Location: 69547 - 70128 (+)
Type: TC
Location: 69547 - 70128 (+)
Gene ID: k141_10185_58
Type: TC
Location: 70184 - 70768 (+)
Type: TC
Location: 70184 - 70768 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.