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Genome Details

Selected Rep_genome_ID: CGMR076566
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Rikenellaceae
→
Genus
Alistipes_A
→
Species
Alistipes_A merdigallinarum
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
CGMR076566 2,552,984 99.04% 0% China Asia CGMR
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
CGMR076566_CGC22 CGCFAM_00001 Yes 9 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
CGMR076566_CGC21 CGCFAM_00061 Yes 6 3
CGMR076566_CGC24 CGCFAM_00096 Yes 6 3
CGMR076566_CGC4 CGCFAM_00915 Yes 11 1
CGMR076566_CGC20 CGCFAM_00923 Yes 3 1
CGMR076566_CGC25 CGCFAM_01217 Yes 5 2
CGMR076566_CGC1 CGCFAM_01423 Yes 7 2
CGMR076566_CGC23 CGCFAM_01784 Yes 3 2
CGMR076566_CGC38 CGCFAM_01971 Yes 7 2
CGMR076566_CGC26 CGCFAM_02153 Yes 3 1
CGMR076566_CGC7 CGCFAM_02163 Yes 5 1
CGMR076566_CGC6 CGCFAM_03319 Yes 3 2
CGMR076566_CGC17 CGCFAM_03321 Yes 3 1
CGMR076566_CGC13 CGCFAM_03644 Yes 11 5
CGMR076566_CGC2 CGCFAM_05215 Yes 6 2
CGMR076566_CGC33 CGCFAM_05216 Yes 5 2
CGMR076566_CGC28 CGCFAM_05761 Yes 7 2
CGMR076566_CGC35 CGCFAM_05762 Yes 7 3
CGMR076566_CGC39 CGCFAM_05763 Yes 3 1
CGMR076566_CGC15 CGCFAM_07947 Yes 4 1
CGMR076566_CGC18 CGCFAM_08970 Yes 8 1
CGMR076566_CGC36 CGCFAM_08971 Yes 5 2
CGMR076566_CGC8 CGCFAM_08972 Yes 13 6
Top CAZyme Families