Cluster: CGMR076566_CGC35
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR076566
- CGC Family ID: CGCFAM_05762
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_4752 | k141_4752_30 | 29481 | 30830 | + | 2.A.66.1.28 |
| pfam | k141_4752 | k141_4752_31 | 30848 | 31924 | + | IMS | IMS_HHH | IMS_C | IMS_HHH_1 |
| CAZyme | k141_4752 | k141_4752_32 | 31937 | 32686 | - | CE4 |
| pfam | k141_4752 | k141_4752_33 | 32719 | 33897 | - | AP_endonuc_2 | UxuA |
| pfam | k141_4752 | k141_4752_34 | 33937 | 34749 | - | adh_short | Epimerase | KR | adh_short_C2 |
| CAZyme | k141_4752 | k141_4752_35 | 34913 | 37168 | + | GH78 |
| CAZyme | k141_4752 | k141_4752_36 | 37229 | 38998 | + | GH78 |
Gene ID: k141_4752_30
Type: TC
Location: 29481 - 30830 (+)
Type: TC
Location: 29481 - 30830 (+)
Gene ID: k141_4752_31
Type: pfam
Location: 30848 - 31924 (+)
Type: pfam
Location: 30848 - 31924 (+)
Gene ID: k141_4752_32
Type: CAZyme
Location: 31937 - 32686 (-)
Type: CAZyme
Location: 31937 - 32686 (-)
Gene ID: k141_4752_33
Type: pfam
Location: 32719 - 33897 (-)
Type: pfam
Location: 32719 - 33897 (-)
Gene ID: k141_4752_34
Type: pfam
Location: 33937 - 34749 (-)
Type: pfam
Location: 33937 - 34749 (-)
Gene ID: k141_4752_35
Type: CAZyme
Location: 34913 - 37168 (+)
Type: CAZyme
Location: 34913 - 37168 (+)
Gene ID: k141_4752_36
Type: CAZyme
Location: 37229 - 38998 (+)
Type: CAZyme
Location: 37229 - 38998 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.