Cluster: CGMR076566_CGC28
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR076566
- CGC Family ID: CGCFAM_05761
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_4209 | k141_4209_14 | 19652 | 20320 | + | 9.B.104.1.2 |
| pfam | k141_4209 | k141_4209_15 | 20344 | 21474 | + | Exo_endo_phos |
| TC | k141_4209 | k141_4209_16 | 21631 | 23130 | - | 2.A.3.7.3 |
| pfam | k141_4209 | k141_4209_17 | 23244 | 24674 | - | Pyridoxal_deC |
| NULL(UNKNOWN) | k141_4209 | k141_4209_18 | 24717 | 24884 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_4209 | k141_4209_19 | 25337 | 28414 | - | GH106 |
| CAZyme | k141_4209 | k141_4209_20 | 28593 | 31052 | + | GH78 |
Gene ID: k141_4209_14
Type: TC
Location: 19652 - 20320 (+)
Type: TC
Location: 19652 - 20320 (+)
Gene ID: k141_4209_15
Type: pfam
Location: 20344 - 21474 (+)
Type: pfam
Location: 20344 - 21474 (+)
Gene ID: k141_4209_16
Type: TC
Location: 21631 - 23130 (-)
Type: TC
Location: 21631 - 23130 (-)
Gene ID: k141_4209_17
Type: pfam
Location: 23244 - 24674 (-)
Type: pfam
Location: 23244 - 24674 (-)
Gene ID: k141_4209_18
Type:
Location: 24717 - 24884 (+)
Type:
Location: 24717 - 24884 (+)
Gene ID: k141_4209_19
Type: CAZyme
Location: 25337 - 28414 (-)
Type: CAZyme
Location: 25337 - 28414 (-)
Gene ID: k141_4209_20
Type: CAZyme
Location: 28593 - 31052 (+)
Type: CAZyme
Location: 28593 - 31052 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.