Cluster: CGMR076566_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR076566
- CGC Family ID: CGCFAM_01217
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_56264 | k141_56264_52 | 62233 | 62994 | - | GT2 |
| NULL(UNKNOWN) | k141_56264 | k141_56264_53 | 63006 | 63293 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_56264 | k141_56264_54 | 63462 | 64802 | + | 2.A.38.1.1 |
| pfam | k141_56264 | k141_56264_55 | 64810 | 66327 | + | GH3 | GH3_M | GH3_C |
| CAZyme | k141_56264 | k141_56264_56 | 66324 | 67484 | + | GT4 |
Gene ID: k141_56264_52
Type: CAZyme
Location: 62233 - 62994 (-)
Type: CAZyme
Location: 62233 - 62994 (-)
Gene ID: k141_56264_53
Type:
Location: 63006 - 63293 (-)
Type:
Location: 63006 - 63293 (-)
Gene ID: k141_56264_54
Type: TC
Location: 63462 - 64802 (+)
Type: TC
Location: 63462 - 64802 (+)
Gene ID: k141_56264_55
Type: pfam
Location: 64810 - 66327 (+)
Type: pfam
Location: 64810 - 66327 (+)
Gene ID: k141_56264_56
Type: CAZyme
Location: 66324 - 67484 (+)
Type: CAZyme
Location: 66324 - 67484 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.