Cluster: CGMR076566_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR076566
- CGC Family ID: CGCFAM_01423
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_385483 | k141_385483_28 | 30148 | 31680 | + | 3.B.1.1.2 |
| pfam | k141_385483 | k141_385483_29 | 31923 | 35024 | + | DUF6562 |
| TC | k141_385483 | k141_385483_30 | 35198 | 36355 | - | 2.A.1.7.17 |
| STP | k141_385483 | k141_385483_31 | 36439 | 37029 | - | SIS |
| STP | k141_385483 | k141_385483_32 | 37035 | 38009 | - | Glucokinase |
| CAZyme | k141_385483 | k141_385483_33 | 38017 | 40425 | - | GH2 |
| CAZyme | k141_385483 | k141_385483_34 | 40478 | 43135 | - | CBM67 | GH78 |
Gene ID: k141_385483_28
Type: TC
Location: 30148 - 31680 (+)
Type: TC
Location: 30148 - 31680 (+)
Gene ID: k141_385483_29
Type: pfam
Location: 31923 - 35024 (+)
Type: pfam
Location: 31923 - 35024 (+)
Gene ID: k141_385483_30
Type: TC
Location: 35198 - 36355 (-)
Type: TC
Location: 35198 - 36355 (-)
Gene ID: k141_385483_31
Type: STP
Location: 36439 - 37029 (-)
Type: STP
Location: 36439 - 37029 (-)
Gene ID: k141_385483_32
Type: STP
Location: 37035 - 38009 (-)
Type: STP
Location: 37035 - 38009 (-)
Gene ID: k141_385483_33
Type: CAZyme
Location: 38017 - 40425 (-)
Type: CAZyme
Location: 38017 - 40425 (-)
Gene ID: k141_385483_34
Type: CAZyme
Location: 40478 - 43135 (-)
Type: CAZyme
Location: 40478 - 43135 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.