Cluster: CGMR076566_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076566
- CGC Family ID: CGCFAM_07947
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_118189 | k141_118189_28 | 42533 | 43213 | + | 3.A.1.122.2 |
| pfam | k141_118189 | k141_118189_29 | 43300 | 44301 | + | Ldh_1_N | Ldh_1_C |
| peptidase | k141_118189 | k141_118189_30 | 44828 | 45898 | + | S09.UNW |
| CAZyme | k141_118189 | k141_118189_31 | 46266 | 48164 | + | GH127 |
Gene ID: k141_118189_28
Type: TC
Location: 42533 - 43213 (+)
Type: TC
Location: 42533 - 43213 (+)
Gene ID: k141_118189_29
Type: pfam
Location: 43300 - 44301 (+)
Type: pfam
Location: 43300 - 44301 (+)
Gene ID: k141_118189_30
Type: peptidase
Location: 44828 - 45898 (+)
Type: peptidase
Location: 44828 - 45898 (+)
Gene ID: k141_118189_31
Type: CAZyme
Location: 46266 - 48164 (+)
Type: CAZyme
Location: 46266 - 48164 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.