Cluster: CGMR076566_CGC38
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR076566
- CGC Family ID: CGCFAM_01971
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_4752 | k141_4752_74 | 91439 | 93040 | - | GH20 |
| CAZyme | k141_4752 | k141_4752_75 | 93096 | 94064 | - | GH32 |
| pfam | k141_4752 | k141_4752_76 | 94116 | 94547 | - | Biotin_lipoyl |
| NULL(UNKNOWN) | k141_4752 | k141_4752_77 | 94588 | 94815 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_4752 | k141_4752_78 | 94818 | 96380 | - | 3.B.1.1.2 |
| STP | k141_4752 | k141_4752_79 | 96400 | 96810 | - | Glyoxalase |
| TC | k141_4752 | k141_4752_80 | 96863 | 98017 | - | 9.B.97.1.2 |
Gene ID: k141_4752_74
Type: CAZyme
Location: 91439 - 93040 (-)
Type: CAZyme
Location: 91439 - 93040 (-)
Gene ID: k141_4752_75
Type: CAZyme
Location: 93096 - 94064 (-)
Type: CAZyme
Location: 93096 - 94064 (-)
Gene ID: k141_4752_76
Type: pfam
Location: 94116 - 94547 (-)
Type: pfam
Location: 94116 - 94547 (-)
Gene ID: k141_4752_77
Type:
Location: 94588 - 94815 (-)
Type:
Location: 94588 - 94815 (-)
Gene ID: k141_4752_78
Type: TC
Location: 94818 - 96380 (-)
Type: TC
Location: 94818 - 96380 (-)
Gene ID: k141_4752_79
Type: STP
Location: 96400 - 96810 (-)
Type: STP
Location: 96400 - 96810 (-)
Gene ID: k141_4752_80
Type: TC
Location: 96863 - 98017 (-)
Type: TC
Location: 96863 - 98017 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.