Cluster: CGMR076566_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR076566
- CGC Family ID: CGCFAM_00096
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_234818 | k141_234818_5 | 3369 | 4394 | + | 9.B.18.2.1 |
| pfam | k141_234818 | k141_234818_6 | 4409 | 5911 | + | Polysacc_synt |
| CAZyme | k141_234818 | k141_234818_7 | 5945 | 7093 | + | GT2 |
| TC | k141_234818 | k141_234818_8 | 7097 | 8287 | + | 9.B.183.1.9 |
| CAZyme | k141_234818 | k141_234818_9 | 8299 | 9417 | + | GT4 |
| CAZyme | k141_234818 | k141_234818_10 | 9407 | 10012 | + | GT2 |
Gene ID: k141_234818_5
Type: TC
Location: 3369 - 4394 (+)
Type: TC
Location: 3369 - 4394 (+)
Gene ID: k141_234818_6
Type: pfam
Location: 4409 - 5911 (+)
Type: pfam
Location: 4409 - 5911 (+)
Gene ID: k141_234818_7
Type: CAZyme
Location: 5945 - 7093 (+)
Type: CAZyme
Location: 5945 - 7093 (+)
Gene ID: k141_234818_8
Type: TC
Location: 7097 - 8287 (+)
Type: TC
Location: 7097 - 8287 (+)
Gene ID: k141_234818_9
Type: CAZyme
Location: 8299 - 9417 (+)
Type: CAZyme
Location: 8299 - 9417 (+)
Gene ID: k141_234818_10
Type: CAZyme
Location: 9407 - 10012 (+)
Type: CAZyme
Location: 9407 - 10012 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.