Cluster: CGMR076566_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR076566
- CGC Family ID: CGCFAM_05215
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_378578 | k141_378578_6 | 6769 | 7512 | + | 3.A.1.27.2 |
| TC | k141_378578 | k141_378578_7 | 7515 | 8273 | + | 3.A.1.27.5 |
| pfam | k141_378578 | k141_378578_8 | 8458 | 9462 | + | Gp_dh_N | Gp_dh_C |
| CAZyme | k141_378578 | k141_378578_9 | 9713 | 11128 | + | GH109 |
| pfam | k141_378578 | k141_378578_10 | 11194 | 12273 | + | APH |
| CAZyme | k141_378578 | k141_378578_11 | 12353 | 13264 | + | GT2 |
Gene ID: k141_378578_6
Type: TC
Location: 6769 - 7512 (+)
Type: TC
Location: 6769 - 7512 (+)
Gene ID: k141_378578_7
Type: TC
Location: 7515 - 8273 (+)
Type: TC
Location: 7515 - 8273 (+)
Gene ID: k141_378578_8
Type: pfam
Location: 8458 - 9462 (+)
Type: pfam
Location: 8458 - 9462 (+)
Gene ID: k141_378578_9
Type: CAZyme
Location: 9713 - 11128 (+)
Type: CAZyme
Location: 9713 - 11128 (+)
Gene ID: k141_378578_10
Type: pfam
Location: 11194 - 12273 (+)
Type: pfam
Location: 11194 - 12273 (+)
Gene ID: k141_378578_11
Type: CAZyme
Location: 12353 - 13264 (+)
Type: CAZyme
Location: 12353 - 13264 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.