Cluster: CGMR076566_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR076566
- CGC Family ID: CGCFAM_08971
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_4752 | k141_4752_41 | 43878 | 45326 | + | GH95 |
| CAZyme | k141_4752 | k141_4752_42 | 45378 | 46283 | + | GH95 |
| pfam | k141_4752 | k141_4752_43 | 46445 | 46894 | - | YqeY |
| STP | k141_4752 | k141_4752_44 | 46968 | 48932 | - | HATPase_c |
| TC | k141_4752 | k141_4752_45 | 49072 | 49812 | - | 3.A.1.140.1 |
Gene ID: k141_4752_41
Type: CAZyme
Location: 43878 - 45326 (+)
Type: CAZyme
Location: 43878 - 45326 (+)
Gene ID: k141_4752_42
Type: CAZyme
Location: 45378 - 46283 (+)
Type: CAZyme
Location: 45378 - 46283 (+)
Gene ID: k141_4752_43
Type: pfam
Location: 46445 - 46894 (-)
Type: pfam
Location: 46445 - 46894 (-)
Gene ID: k141_4752_44
Type: STP
Location: 46968 - 48932 (-)
Type: STP
Location: 46968 - 48932 (-)
Gene ID: k141_4752_45
Type: TC
Location: 49072 - 49812 (-)
Type: TC
Location: 49072 - 49812 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.