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Genome Details

Selected Rep_genome_ID: CGMR057071
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
Erysipelotrichales
→
Family
Erysipelotrichaceae
→
Genus
Holdemania
→
Species
Holdemania filiformis
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A125.bin_33 3,609,257 91.43% 0.79% China(Inner Mongolia) Asia IMGG
CGMR057071 3,343,541 95.24% 0.79% China Asia CGMR
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
CGMR057071_CGC17 CGCFAM_00012 Yes 5 1 host glycan/beta-glucan
CGMR057071_CGC29 CGCFAM_00012 Yes 7 3 host glycan/beta-glucan
CGMR057071_CGC44 CGCFAM_00012 Yes 5 1 host glycan/beta-glucan
CGMR057071_CGC15 CGCFAM_00014 Yes 5 3 host glycan
CGMR057071_CGC32 CGCFAM_00020 Yes 4 1 host glycan/beta-glucan
CGMR057071_CGC9 CGCFAM_00042 Yes 3 1 beta-glucan
CGMR057071_CGC11 CGCFAM_00176 Yes 6 1 beta-glucan
CGMR057071_CGC13 CGCFAM_00508 Yes 3 1
CGMR057071_CGC24 CGCFAM_00545 Yes 6 1
CGMR057071_CGC7 CGCFAM_00652 Yes 4 2
CGMR057071_CGC19 CGCFAM_01263 Yes 5 1
CGMR057071_CGC27 CGCFAM_01265 Yes 4 2
CGMR057071_CGC31 CGCFAM_01942 Yes 3 1
CGMR057071_CGC5 CGCFAM_02980 Yes 7 1
CGMR057071_CGC28 CGCFAM_02983 Yes 8 1
CGMR057071_CGC36 CGCFAM_04238 Yes 4 1
CGMR057071_CGC35 CGCFAM_04284 Yes 5 1
CGMR057071_CGC33 CGCFAM_05339 Yes 5 1
CGMR057071_CGC1 CGCFAM_06532 Yes 5 1
CGMR057071_CGC41 CGCFAM_06533 Yes 7 1
CGMR057071_CGC10 CGCFAM_06535 Yes 3 1
CGMR057071_CGC38 CGCFAM_06689 Yes 10 2
CGMR057071_CGC43 CGCFAM_08744 Yes 6 1
Top CAZyme Families