Cluster: CGMR057071_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: CGMR057071
- CGC Family ID: CGCFAM_00012
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_2298 | k141_2298_6 | 6011 | 7420 | + | GH1 |
| TC | k141_2298 | k141_2298_7 | 7450 | 8853 | + | 2.A.66.1.25 |
| pfam | k141_2298 | k141_2298_8 | 8807 | 9271 | + | DUF3284 |
| TC | k141_2298 | k141_2298_9 | 9427 | 10704 | + | 4.A.3.2.3 |
| TC | k141_2298 | k141_2298_10 | 10720 | 11022 | + | 4.A.3.2.2 |
Gene ID: k141_2298_6
Type: CAZyme
Location: 6011 - 7420 (+)
Type: CAZyme
Location: 6011 - 7420 (+)
Gene ID: k141_2298_7
Type: TC
Location: 7450 - 8853 (+)
Type: TC
Location: 7450 - 8853 (+)
Gene ID: k141_2298_8
Type: pfam
Location: 8807 - 9271 (+)
Type: pfam
Location: 8807 - 9271 (+)
Gene ID: k141_2298_9
Type: TC
Location: 9427 - 10704 (+)
Type: TC
Location: 9427 - 10704 (+)
Gene ID: k141_2298_10
Type: TC
Location: 10720 - 11022 (+)
Type: TC
Location: 10720 - 11022 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania filiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.