Cluster: CGMR057071_CGC43
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR057071
- CGC Family ID: CGCFAM_08744
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_76892 | k141_76892_7 | 7058 | 8713 | + | GH13_31 |
| pfam | k141_76892 | k141_76892_8 | 8872 | 9537 | - | Hydrolase | HAD | HAD_2 |
| STP | k141_76892 | k141_76892_9 | 9539 | 10561 | - | Aminotran_1_2 |
| TC | k141_76892 | k141_76892_10 | 10676 | 11509 | - | 4.A.6.1.19 |
| TC | k141_76892 | k141_76892_11 | 11524 | 12264 | - | 4.A.6.1.19 |
| TC | k141_76892 | k141_76892_12 | 12289 | 12783 | - | 4.A.6.1.1 |
Gene ID: k141_76892_7
Type: CAZyme
Location: 7058 - 8713 (+)
Type: CAZyme
Location: 7058 - 8713 (+)
Gene ID: k141_76892_8
Type: pfam
Location: 8872 - 9537 (-)
Type: pfam
Location: 8872 - 9537 (-)
Gene ID: k141_76892_9
Type: STP
Location: 9539 - 10561 (-)
Type: STP
Location: 9539 - 10561 (-)
Gene ID: k141_76892_10
Type: TC
Location: 10676 - 11509 (-)
Type: TC
Location: 10676 - 11509 (-)
Gene ID: k141_76892_11
Type: TC
Location: 11524 - 12264 (-)
Type: TC
Location: 11524 - 12264 (-)
Gene ID: k141_76892_12
Type: TC
Location: 12289 - 12783 (-)
Type: TC
Location: 12289 - 12783 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania filiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.