Cluster: CGMR057071_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR057071
- CGC Family ID: CGCFAM_01263
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_31297 | k141_31297_3 | 1947 | 3164 | - | 3.A.1.122.2 |
| pfam | k141_31297 | k141_31297_4 | 3177 | 4886 | - | HlyD_3 | HlyD_D23 |
| TC | k141_31297 | k141_31297_5 | 4889 | 5587 | - | 3.A.1.122.7 |
| TF | k141_31297 | k141_31297_6 | 5991 | 6599 | - | MerR |
| CAZyme | k141_31297 | k141_31297_7 | 6803 | 8200 | - | AA4 |
Gene ID: k141_31297_3
Type: TC
Location: 1947 - 3164 (-)
Type: TC
Location: 1947 - 3164 (-)
Gene ID: k141_31297_4
Type: pfam
Location: 3177 - 4886 (-)
Type: pfam
Location: 3177 - 4886 (-)
Gene ID: k141_31297_5
Type: TC
Location: 4889 - 5587 (-)
Type: TC
Location: 4889 - 5587 (-)
Gene ID: k141_31297_6
Type: TF
Location: 5991 - 6599 (-)
Type: TF
Location: 5991 - 6599 (-)
Gene ID: k141_31297_7
Type: CAZyme
Location: 6803 - 8200 (-)
Type: CAZyme
Location: 6803 - 8200 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania filiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.