Cluster: CGMR057071_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: CGMR057071
- CGC Family ID: CGCFAM_00176
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_126932 | k141_126932_19 | 19237 | 19821 | + | 2.A.115.2.14 |
| TF | k141_126932 | k141_126932_20 | 20062 | 21957 | - | HTH_11 | Mga |
| TC | k141_126932 | k141_126932_21 | 22152 | 22481 | + | 4.A.3.2.3 |
| TC | k141_126932 | k141_126932_22 | 22504 | 23748 | + | 4.A.3.2.8 |
| pfam | k141_126932 | k141_126932_23 | 23838 | 24203 | + | PTS_IIA |
| CAZyme | k141_126932 | k141_126932_24 | 24224 | 25675 | + | GH1 |
Gene ID: k141_126932_19
Type: TC
Location: 19237 - 19821 (+)
Type: TC
Location: 19237 - 19821 (+)
Gene ID: k141_126932_20
Type: TF
Location: 20062 - 21957 (-)
Type: TF
Location: 20062 - 21957 (-)
Gene ID: k141_126932_21
Type: TC
Location: 22152 - 22481 (+)
Type: TC
Location: 22152 - 22481 (+)
Gene ID: k141_126932_22
Type: TC
Location: 22504 - 23748 (+)
Type: TC
Location: 22504 - 23748 (+)
Gene ID: k141_126932_23
Type: pfam
Location: 23838 - 24203 (+)
Type: pfam
Location: 23838 - 24203 (+)
Gene ID: k141_126932_24
Type: CAZyme
Location: 24224 - 25675 (+)
Type: CAZyme
Location: 24224 - 25675 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania filiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.