Cluster: CGMR057071_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate: host glycan
- Genome ID: CGMR057071
- CGC Family ID: CGCFAM_00014
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_125203 | k141_125203_22 | 20369 | 21814 | + | GH1 |
| CAZyme | k141_125203 | k141_125203_23 | 21826 | 23259 | + | GH1 |
| CAZyme | k141_125203 | k141_125203_24 | 23263 | 24711 | + | GH1 |
| pfam | k141_125203 | k141_125203_25 | 24992 | 25321 | + | PTS_IIB |
| TC | k141_125203 | k141_125203_26 | 25314 | 26576 | + | 4.A.3.1.1 |
Gene ID: k141_125203_22
Type: CAZyme
Location: 20369 - 21814 (+)
Type: CAZyme
Location: 20369 - 21814 (+)
Gene ID: k141_125203_23
Type: CAZyme
Location: 21826 - 23259 (+)
Type: CAZyme
Location: 21826 - 23259 (+)
Gene ID: k141_125203_24
Type: CAZyme
Location: 23263 - 24711 (+)
Type: CAZyme
Location: 23263 - 24711 (+)
Gene ID: k141_125203_25
Type: pfam
Location: 24992 - 25321 (+)
Type: pfam
Location: 24992 - 25321 (+)
Gene ID: k141_125203_26
Type: TC
Location: 25314 - 26576 (+)
Type: TC
Location: 25314 - 26576 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania filiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.