Cluster: CGMR057071_CGC32
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: CGMR057071
- CGC Family ID: CGCFAM_00020
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_105794 | k141_105794_98 | 107602 | 109044 | - | GH1 |
| TC | k141_105794 | k141_105794_99 | 109048 | 110412 | - | 4.A.1.2.11 |
| pfam | k141_105794 | k141_105794_100 | 110654 | 111490 | - | PRD | PRD | CAT_RBD |
| TC | k141_105794 | k141_105794_101 | 111487 | 111957 | - | 4.A.1.1.14 |
Gene ID: k141_105794_98
Type: CAZyme
Location: 107602 - 109044 (-)
Type: CAZyme
Location: 107602 - 109044 (-)
Gene ID: k141_105794_99
Type: TC
Location: 109048 - 110412 (-)
Type: TC
Location: 109048 - 110412 (-)
Gene ID: k141_105794_100
Type: pfam
Location: 110654 - 111490 (-)
Type: pfam
Location: 110654 - 111490 (-)
Gene ID: k141_105794_101
Type: TC
Location: 111487 - 111957 (-)
Type: TC
Location: 111487 - 111957 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania filiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_105794_101 | vegetarian > vegan | 18.01381 | 0.02973 |