Cluster: CGMR057071_CGC41
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR057071
- CGC Family ID: CGCFAM_06533
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_100125 | k141_100125_10 | 8815 | 10227 | - | CE4 |
| TF | k141_100125 | k141_100125_11 | 10765 | 11235 | + | MarR |
| TC | k141_100125 | k141_100125_12 | 11239 | 12996 | + | 3.A.1.208.37 |
| TC | k141_100125 | k141_100125_13 | 12941 | 14638 | + | 3.A.1.135.9 |
| pfam | k141_100125 | k141_100125_14 | 14808 | 16160 | - | AAA_14 | DUF4143 |
| TC | k141_100125 | k141_100125_15 | 16459 | 17238 | - | 3.A.1.14.8 |
| TC | k141_100125 | k141_100125_16 | 17231 | 18226 | - | 3.A.1.14.8 |
Gene ID: k141_100125_10
Type: CAZyme
Location: 8815 - 10227 (-)
Type: CAZyme
Location: 8815 - 10227 (-)
Gene ID: k141_100125_11
Type: TF
Location: 10765 - 11235 (+)
Type: TF
Location: 10765 - 11235 (+)
Gene ID: k141_100125_12
Type: TC
Location: 11239 - 12996 (+)
Type: TC
Location: 11239 - 12996 (+)
Gene ID: k141_100125_13
Type: TC
Location: 12941 - 14638 (+)
Type: TC
Location: 12941 - 14638 (+)
Gene ID: k141_100125_14
Type: pfam
Location: 14808 - 16160 (-)
Type: pfam
Location: 14808 - 16160 (-)
Gene ID: k141_100125_15
Type: TC
Location: 16459 - 17238 (-)
Type: TC
Location: 16459 - 17238 (-)
Gene ID: k141_100125_16
Type: TC
Location: 17231 - 18226 (-)
Type: TC
Location: 17231 - 18226 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania filiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.