Cluster: CGMR057071_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR057071
- CGC Family ID: CGCFAM_02980
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_122652 | k141_122652_13 | 11452 | 12639 | - | CE9 |
| pfam | k141_122652 | k141_122652_14 | 12639 | 13448 | - | YdjC |
| NULL(UNKNOWN) | k141_122652 | k141_122652_15 | 13445 | 14341 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_122652 | k141_122652_16 | 14406 | 15224 | - | 4.A.6.1.19 |
| TC | k141_122652 | k141_122652_17 | 15224 | 16015 | - | 4.A.6.1.19 |
| TC | k141_122652 | k141_122652_18 | 16047 | 16541 | - | 4.A.6.1.1 |
| TC | k141_122652 | k141_122652_19 | 16559 | 16921 | - | 4.A.6.1.19 |
Gene ID: k141_122652_13
Type: CAZyme
Location: 11452 - 12639 (-)
Type: CAZyme
Location: 11452 - 12639 (-)
Gene ID: k141_122652_14
Type: pfam
Location: 12639 - 13448 (-)
Type: pfam
Location: 12639 - 13448 (-)
Gene ID: k141_122652_15
Type:
Location: 13445 - 14341 (-)
Type:
Location: 13445 - 14341 (-)
Gene ID: k141_122652_16
Type: TC
Location: 14406 - 15224 (-)
Type: TC
Location: 14406 - 15224 (-)
Gene ID: k141_122652_17
Type: TC
Location: 15224 - 16015 (-)
Type: TC
Location: 15224 - 16015 (-)
Gene ID: k141_122652_18
Type: TC
Location: 16047 - 16541 (-)
Type: TC
Location: 16047 - 16541 (-)
Gene ID: k141_122652_19
Type: TC
Location: 16559 - 16921 (-)
Type: TC
Location: 16559 - 16921 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania filiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.