Cluster: CGMR057071_CGC35
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR057071
- CGC Family ID: CGCFAM_04284
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_35492 | k141_35492_24 | 22997 | 24448 | - | GH1 |
| pfam | k141_35492 | k141_35492_25 | 24621 | 24995 | + | Ribonuc_L-PSP |
| TC | k141_35492 | k141_35492_26 | 25009 | 26385 | + | 4.A.1.2.11 |
| STP | k141_35492 | k141_35492_27 | 26533 | 27744 | + | Aminotran_1_2 |
| TC | k141_35492 | k141_35492_28 | 27737 | 28231 | + | 4.A.1.1.1 |
Gene ID: k141_35492_24
Type: CAZyme
Location: 22997 - 24448 (-)
Type: CAZyme
Location: 22997 - 24448 (-)
Gene ID: k141_35492_25
Type: pfam
Location: 24621 - 24995 (+)
Type: pfam
Location: 24621 - 24995 (+)
Gene ID: k141_35492_26
Type: TC
Location: 25009 - 26385 (+)
Type: TC
Location: 25009 - 26385 (+)
Gene ID: k141_35492_27
Type: STP
Location: 26533 - 27744 (+)
Type: STP
Location: 26533 - 27744 (+)
Gene ID: k141_35492_28
Type: TC
Location: 27737 - 28231 (+)
Type: TC
Location: 27737 - 28231 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania filiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.