Genome Details
Selected Rep_genome_ID: C130.bin_6
Total Genomes Found: 29
Total Genomes Found: 29
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea_A
Species
Dorea_A longicatena
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C130.bin_6 | 2,922,521 | 99.42% | 0% | China(Inner Mongolia) | Asia | IMGG |
| CGMR076156 | 2,590,314 | 99.42% | 0% | China | Asia | CGMR |
| KY054_bin.22 | 2,742,334 | 99.42% | 0.29% | NA | Africa | H3AfricaPhase2 |
| Rep_2289 | 2,705,038 | 96.2963% | 0% | NA | NA | WIS |
| SPMP03_bin.83 | 2,989,279 | 97.66% | 0% | Singapore | Asia | SPMP |
| SPMP04_bin.87 | 2,806,388 | 98.77% | 0.19% | Singapore | Asia | SPMP |
| SPMP08_bin.12 | 2,816,784 | 97.86% | 0.88% | Singapore | Asia | SPMP |
| SPMP11_bin.30 | 2,789,640 | 98.54% | 0% | Singapore | Asia | SPMP |
| SPMP12_bin.22 | 2,695,569 | 98.54% | 0% | Singapore | Asia | SPMP |
| SPMP13_bin.115 | 2,538,234 | 96.2% | 1.95% | Singapore | Asia | SPMP |
| SPMP14_bin.17 | 2,850,454 | 98.68% | 0.83% | Singapore | Asia | SPMP |
| SPMP17_bin.64 | 2,777,348 | 93.47% | 0.97% | Singapore | Asia | SPMP |
| SPMP20_bin.57 | 2,905,624 | 98.54% | 3.33% | Singapore | Asia | SPMP |
| SPMP23_bin.59 | 2,743,195 | 93.86% | 4.09% | Singapore | Asia | SPMP |
| SPMP26_bin.94 | 2,539,520 | 94.62% | 0% | Singapore | Asia | SPMP |
| SPMP31_bin.11 | 2,656,578 | 91.81% | 0.58% | Singapore | Asia | SPMP |
| SPMP33_bin.57 | 2,897,248 | 97.08% | 1.17% | Singapore | Asia | SPMP |
| SPMP43_bin.11 | 2,642,515 | 92.89% | 0% | Singapore | Asia | SPMP |
| SPMP45_bin.14 | 2,720,478 | 96.96% | 0.58% | Singapore | Asia | SPMP |
| SPMP47_bin.52 | 2,950,544 | 100% | 1.46% | Singapore | Asia | SPMP |
| SPMP57_bin.1 | 2,420,144 | 95.03% | 0% | Singapore | Asia | SPMP |
| SPMP63_bin.89 | 3,164,338 | 94.04% | 0.12% | Singapore | Asia | SPMP |
| SPMP73_bin.14 | 2,545,207 | 91.81% | 1.36% | Singapore | Asia | SPMP |
| SPMP78_bin.72 | 2,889,687 | 97.08% | 2.34% | Singapore | Asia | SPMP |
| SPMP81_bin.32 | 2,455,827 | 91.23% | 1.1% | Singapore | Asia | SPMP |
| SPMP84_bin.22 | 2,627,569 | 98.54% | 0% | Singapore | Asia | SPMP |
| SPMP91_bin.7 | 2,276,464 | 92.87% | 1.75% | Singapore | Asia | SPMP |
| SPMP94_bin.88 | 2,828,989 | 99.42% | 1.17% | Singapore | Asia | SPMP |
| SPMP97_bin.42 | 2,503,002 | 96.3% | 0% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| C130.bin_6_CGC8 | CGCFAM_00012 | Yes | 6 | 1 | host glycan/beta-glucan |
| C130.bin_6_CGC32 | CGCFAM_00020 | Yes | 7 | 1 | host glycan/beta-glucan |
| C130.bin_6_CGC26 | CGCFAM_00039 | Yes | 8 | 4 | |
| C130.bin_6_CGC4 | CGCFAM_00094 | Yes | 5 | 1 | beta-mannan/fructan |
| C130.bin_6_CGC5 | CGCFAM_00097 | Yes | 5 | 1 | |
| C130.bin_6_CGC18 | CGCFAM_00103 | Yes | 9 | 3 | |
| C130.bin_6_CGC6 | CGCFAM_00187 | Yes | 3 | 1 | |
| C130.bin_6_CGC2 | CGCFAM_00269 | Yes | 8 | 1 | |
| C130.bin_6_CGC27 | CGCFAM_00550 | Yes | 5 | 2 | |
| C130.bin_6_CGC7 | CGCFAM_01275 | Yes | 18 | 12 | |
| C130.bin_6_CGC28 | CGCFAM_01523 | Yes | 4 | 1 | |
| C130.bin_6_CGC21 | CGCFAM_01689 | Yes | 6 | 1 | |
| C130.bin_6_CGC19 | CGCFAM_02075 | Yes | 4 | 1 | |
| C130.bin_6_CGC1 | CGCFAM_03625 | Yes | 7 | 2 | |
| C130.bin_6_CGC9 | CGCFAM_04321 | Yes | 6 | 1 | |
| C130.bin_6_CGC12 | CGCFAM_04626 | Yes | 4 | 1 | |
| C130.bin_6_CGC20 | CGCFAM_05198 | Yes | 5 | 1 | |
| PUL0024_C130.bin_6_C0 | CGCFAM_06446 | Yes | 11 | 1 | fructan |
| C130.bin_6_CGC13 | CGCFAM_07909 | Yes | 6 | 2 | |
| C130.bin_6_CGC14 | CGCFAM_07910 | Yes | 3 | 1 | |
| C130.bin_6_CGC17 | CGCFAM_07911 | Yes | 11 | 8 |
Top CAZyme Families