Cluster: C130.bin_6_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: C130.bin_6
- CGC Family ID: CGCFAM_01689
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C130_contig_81 | C130_contig_81_894 | 971319 | 973052 | + | 8.A.59.2.1 |
| TF | C130_contig_81 | C130_contig_81_895 | 973049 | 974701 | + | HTH_AraC |
| pfam | C130_contig_81 | C130_contig_81_896 | 975014 | 975913 | + | AP_endonuc_2 | UxuA |
| CAZyme | C130_contig_81 | C130_contig_81_897 | 976042 | 977055 | + | GH177 |
| TC | C130_contig_81 | C130_contig_81_898 | 977166 | 978581 | + | 2.A.2.3.1 |
| TC | C130_contig_81 | C130_contig_81_899 | 978583 | 979188 | + | 2.A.115.2.14 |
Gene ID: C130_contig_81_894
Type: TC
Location: 971319 - 973052 (+)
Type: TC
Location: 971319 - 973052 (+)
Gene ID: C130_contig_81_895
Type: TF
Location: 973049 - 974701 (+)
Type: TF
Location: 973049 - 974701 (+)
Gene ID: C130_contig_81_896
Type: pfam
Location: 975014 - 975913 (+)
Type: pfam
Location: 975014 - 975913 (+)
Gene ID: C130_contig_81_897
Type: CAZyme
Location: 976042 - 977055 (+)
Type: CAZyme
Location: 976042 - 977055 (+)
Gene ID: C130_contig_81_898
Type: TC
Location: 977166 - 978581 (+)
Type: TC
Location: 977166 - 978581 (+)
Gene ID: C130_contig_81_899
Type: TC
Location: 978583 - 979188 (+)
Type: TC
Location: 978583 - 979188 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea_A
Species
Dorea_A longicatena
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.