Cluster: C130.bin_6_CGC32
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: C130.bin_6
- CGC Family ID: CGCFAM_00020
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C130_contig_81 | C130_contig_81_2171 | 2371931 | 2373124 | - | 3.D.10.1.4 |
| NULL(UNKNOWN) | C130_contig_81 | C130_contig_81_2172 | 2373477 | 2373674 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C130_contig_81 | C130_contig_81_2173 | 2373761 | 2375221 | - | GH1 |
| TC | C130_contig_81 | C130_contig_81_2174 | 2375233 | 2377128 | - | 4.A.1.2.11 |
| pfam | C130_contig_81 | C130_contig_81_2175 | 2377266 | 2378222 | - | PRD | PRD | CAT_RBD |
| pfam | C130_contig_81 | C130_contig_81_2176 | 2378524 | 2380836 | - | FtsX | FtsX |
| TC | C130_contig_81 | C130_contig_81_2177 | 2380851 | 2381549 | - | 3.A.1.134.3 |
Gene ID: C130_contig_81_2171
Type: TC
Location: 2371931 - 2373124 (-)
Type: TC
Location: 2371931 - 2373124 (-)
Gene ID: C130_contig_81_2172
Type:
Location: 2373477 - 2373674 (-)
Type:
Location: 2373477 - 2373674 (-)
Gene ID: C130_contig_81_2173
Type: CAZyme
Location: 2373761 - 2375221 (-)
Type: CAZyme
Location: 2373761 - 2375221 (-)
Gene ID: C130_contig_81_2174
Type: TC
Location: 2375233 - 2377128 (-)
Type: TC
Location: 2375233 - 2377128 (-)
Gene ID: C130_contig_81_2175
Type: pfam
Location: 2377266 - 2378222 (-)
Type: pfam
Location: 2377266 - 2378222 (-)
Gene ID: C130_contig_81_2176
Type: pfam
Location: 2378524 - 2380836 (-)
Type: pfam
Location: 2378524 - 2380836 (-)
Gene ID: C130_contig_81_2177
Type: TC
Location: 2380851 - 2381549 (-)
Type: TC
Location: 2380851 - 2381549 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea_A
Species
Dorea_A longicatena
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C130_contig_81_2173 | vegan > omnivore | 2.19464 | 0.03500 |
| C130_contig_81_2174 | vegan > omnivore | 1.75979 | 0.03293 |
| C130_contig_81_2177 | vegan > omnivore | 1.37001 | 0.00096 |