Cluster: C130.bin_6_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C130.bin_6
- CGC Family ID: CGCFAM_05198
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C130_contig_81 | C130_contig_81_856 | 931138 | 932049 | + | 2.A.4.7.2 |
| pfam | C130_contig_81 | C130_contig_81_857 | 932160 | 933581 | - | DUF512 | PDZ_6 | Radical_SAM_2 |
| TC | C130_contig_81 | C130_contig_81_858 | 933873 | 935681 | + | 2.A.58.2.2 |
| TF | C130_contig_81 | C130_contig_81_859 | 935735 | 936604 | - | HTH_AraC | HTH_AraC |
| CAZyme | C130_contig_81 | C130_contig_81_860 | 936815 | 939073 | + | GT35 |
Gene ID: C130_contig_81_856
Type: TC
Location: 931138 - 932049 (+)
Type: TC
Location: 931138 - 932049 (+)
Gene ID: C130_contig_81_857
Type: pfam
Location: 932160 - 933581 (-)
Type: pfam
Location: 932160 - 933581 (-)
Gene ID: C130_contig_81_858
Type: TC
Location: 933873 - 935681 (+)
Type: TC
Location: 933873 - 935681 (+)
Gene ID: C130_contig_81_859
Type: TF
Location: 935735 - 936604 (-)
Type: TF
Location: 935735 - 936604 (-)
Gene ID: C130_contig_81_860
Type: CAZyme
Location: 936815 - 939073 (+)
Type: CAZyme
Location: 936815 - 939073 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea_A
Species
Dorea_A longicatena
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C130_contig_81_858 | vegan > omnivore | 1.12517 | 0.02539 |