Cluster: C130.bin_6_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: C130.bin_6
- CGC Family ID: CGCFAM_07909
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C130_contig_81 | C130_contig_81_438 | 476781 | 478103 | + | 3.A.1.1.21 |
| TC | C130_contig_81 | C130_contig_81_439 | 478142 | 479059 | + | 3.A.1.1.20 |
| TC | C130_contig_81 | C130_contig_81_440 | 479062 | 479892 | + | 3.A.1.1.7 |
| CAZyme | C130_contig_81 | C130_contig_81_441 | 479924 | 481267 | + | GH172 |
| CAZyme | C130_contig_81 | C130_contig_81_442 | 481286 | 482767 | + | GH32 |
| TC | C130_contig_81 | C130_contig_81_443 | 482832 | 485129 | - | 3.A.7.7.1 |
Gene ID: C130_contig_81_438
Type: TC
Location: 476781 - 478103 (+)
Type: TC
Location: 476781 - 478103 (+)
Gene ID: C130_contig_81_439
Type: TC
Location: 478142 - 479059 (+)
Type: TC
Location: 478142 - 479059 (+)
Gene ID: C130_contig_81_440
Type: TC
Location: 479062 - 479892 (+)
Type: TC
Location: 479062 - 479892 (+)
Gene ID: C130_contig_81_441
Type: CAZyme
Location: 479924 - 481267 (+)
Type: CAZyme
Location: 479924 - 481267 (+)
Gene ID: C130_contig_81_442
Type: CAZyme
Location: 481286 - 482767 (+)
Type: CAZyme
Location: 481286 - 482767 (+)
Gene ID: C130_contig_81_443
Type: TC
Location: 482832 - 485129 (-)
Type: TC
Location: 482832 - 485129 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea_A
Species
Dorea_A longicatena
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.