Cluster: C130.bin_6_CGC17
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 8
- Substrate:
- Genome ID: C130.bin_6
- CGC Family ID: CGCFAM_07911
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C130_contig_81 | C130_contig_81_574 | 615784 | 617145 | + | 9.B.18.1.3 |
| CAZyme | C130_contig_81 | C130_contig_81_575 | 617142 | 618080 | + | GT2 |
| pfam | C130_contig_81 | C130_contig_81_576 | 618146 | 619045 | + | ATPgrasp_TupA |
| CAZyme | C130_contig_81 | C130_contig_81_577 | 619117 | 620928 | + | GH43_29 |
| pfam | C130_contig_81 | C130_contig_81_578 | 620957 | 623902 | + | Big_2 | Laminin_G_3 | Laminin_G_3 | aBig_2 |
| CAZyme | C130_contig_81 | C130_contig_81_579 | 623937 | 626069 | + | GH43_22 |
| CAZyme | C130_contig_81 | C130_contig_81_580 | 626084 | 630739 | + | GH43_20 | GH43_26 |
| CAZyme | C130_contig_81 | C130_contig_81_581 | 630831 | 634067 | + | GH43_22 |
| CAZyme | C130_contig_81 | C130_contig_81_582 | 634236 | 638606 | + | GH146 |
| CAZyme | C130_contig_81 | C130_contig_81_583 | 638793 | 641696 | + | GH43_22 |
| CAZyme | C130_contig_81 | C130_contig_81_584 | 641881 | 646479 | + | GH43_22 | GH43_34 |
Gene ID: C130_contig_81_574
Type: TC
Location: 615784 - 617145 (+)
Type: TC
Location: 615784 - 617145 (+)
Gene ID: C130_contig_81_575
Type: CAZyme
Location: 617142 - 618080 (+)
Type: CAZyme
Location: 617142 - 618080 (+)
Gene ID: C130_contig_81_576
Type: pfam
Location: 618146 - 619045 (+)
Type: pfam
Location: 618146 - 619045 (+)
Gene ID: C130_contig_81_577
Type: CAZyme
Location: 619117 - 620928 (+)
Type: CAZyme
Location: 619117 - 620928 (+)
Gene ID: C130_contig_81_578
Type: pfam
Location: 620957 - 623902 (+)
Type: pfam
Location: 620957 - 623902 (+)
Gene ID: C130_contig_81_579
Type: CAZyme
Location: 623937 - 626069 (+)
Type: CAZyme
Location: 623937 - 626069 (+)
Gene ID: C130_contig_81_580
Type: CAZyme
Location: 626084 - 630739 (+)
Type: CAZyme
Location: 626084 - 630739 (+)
Gene ID: C130_contig_81_581
Type: CAZyme
Location: 630831 - 634067 (+)
Type: CAZyme
Location: 630831 - 634067 (+)
Gene ID: C130_contig_81_582
Type: CAZyme
Location: 634236 - 638606 (+)
Type: CAZyme
Location: 634236 - 638606 (+)
Gene ID: C130_contig_81_583
Type: CAZyme
Location: 638793 - 641696 (+)
Type: CAZyme
Location: 638793 - 641696 (+)
Gene ID: C130_contig_81_584
Type: CAZyme
Location: 641881 - 646479 (+)
Type: CAZyme
Location: 641881 - 646479 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea_A
Species
Dorea_A longicatena
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.