Cluster: C130.bin_6_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C130.bin_6
- CGC Family ID: CGCFAM_04626
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C130_contig_81 | C130_contig_81_427 | 460949 | 462877 | + | 4.A.2.1.4 |
| STP | C130_contig_81 | C130_contig_81_428 | 462982 | 463239 | + | PTS-HPr |
| TF | C130_contig_81 | C130_contig_81_429 | 463248 | 463991 | + | HTH_DeoR |
| CAZyme | C130_contig_81 | C130_contig_81_430 | 464260 | 465318 | + | CBM50 |
Gene ID: C130_contig_81_427
Type: TC
Location: 460949 - 462877 (+)
Type: TC
Location: 460949 - 462877 (+)
Gene ID: C130_contig_81_428
Type: STP
Location: 462982 - 463239 (+)
Type: STP
Location: 462982 - 463239 (+)
Gene ID: C130_contig_81_429
Type: TF
Location: 463248 - 463991 (+)
Type: TF
Location: 463248 - 463991 (+)
Gene ID: C130_contig_81_430
Type: CAZyme
Location: 464260 - 465318 (+)
Type: CAZyme
Location: 464260 - 465318 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea_A
Species
Dorea_A longicatena
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C130_contig_81_428 | vegan > omnivore | 1.08046 | 0.00096 |