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Cluster: C130.bin_6_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C130_contig_81 C130_contig_81_1295 1420059 1421876 + GT2 | GT2
CAZyme C130_contig_81 C130_contig_81_1296 1421887 1422840 + GT2
TC C130_contig_81 C130_contig_81_1297 1422876 1424279 + 9.B.18.1.1
pfam C130_contig_81 C130_contig_81_1298 1424295 1425404 + LytR_cpsA_psr
CAZyme C130_contig_81 C130_contig_81_1299 1425397 1426314 + GT2
pfam C130_contig_81 C130_contig_81_1300 1426416 1427828 + LytR_cpsA_psr
NULL(UNKNOWN) C130_contig_81 C130_contig_81_1301 1427859 1429559 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C130_contig_81 C130_contig_81_1302 1429666 1430562 - CE4
Gene ID: C130_contig_81_1295
Type: CAZyme
Location: 1420059 - 1421876 (+)
Gene ID: C130_contig_81_1296
Type: CAZyme
Location: 1421887 - 1422840 (+)
Gene ID: C130_contig_81_1297
Type: TC
Location: 1422876 - 1424279 (+)
Gene ID: C130_contig_81_1298
Type: pfam
Location: 1424295 - 1425404 (+)
Gene ID: C130_contig_81_1299
Type: CAZyme
Location: 1425397 - 1426314 (+)
Gene ID: C130_contig_81_1300
Type: pfam
Location: 1426416 - 1427828 (+)
Gene ID: C130_contig_81_1301
Type:
Location: 1427859 - 1429559 (+)
Gene ID: C130_contig_81_1302
Type: CAZyme
Location: 1429666 - 1430562 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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