Cluster: C130.bin_6_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: beta-mannan/fructan
- Genome ID: C130.bin_6
- CGC Family ID: CGCFAM_00094
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C130_contig_67 | C130_contig_67_322 | 338991 | 340862 | + | 3.A.1.135.5 |
| TC | C130_contig_67 | C130_contig_67_323 | 340862 | 342568 | + | 3.A.1.135.5 |
| TF | C130_contig_67 | C130_contig_67_324 | 342713 | 343762 | + | LacI |
| TC | C130_contig_67 | C130_contig_67_325 | 343966 | 345897 | + | 4.A.1.2.12 |
| CAZyme | C130_contig_67 | C130_contig_67_326 | 345943 | 347373 | + | GH32 |
Gene ID: C130_contig_67_322
Type: TC
Location: 338991 - 340862 (+)
Type: TC
Location: 338991 - 340862 (+)
Gene ID: C130_contig_67_323
Type: TC
Location: 340862 - 342568 (+)
Type: TC
Location: 340862 - 342568 (+)
Gene ID: C130_contig_67_324
Type: TF
Location: 342713 - 343762 (+)
Type: TF
Location: 342713 - 343762 (+)
Gene ID: C130_contig_67_325
Type: TC
Location: 343966 - 345897 (+)
Type: TC
Location: 343966 - 345897 (+)
Gene ID: C130_contig_67_326
Type: CAZyme
Location: 345943 - 347373 (+)
Type: CAZyme
Location: 345943 - 347373 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea_A
Species
Dorea_A longicatena
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.