Genome Details
Selected Rep_genome_ID: A54.CMAG_2
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000437255
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A54.CMAG_2 | 2,804,126 | 98.66% | 0% | China(Inner Mongolia) | Asia | IMGG |
| CGMR049959 | 2,081,817 | 97.99% | 0% | China | Asia | CGMR |
| HRGMv2_2890 | 2,123,763 | 98.65% | 0% | South Korea | Asia | HRGM |
| SPMP45_bin.7 | 2,192,132 | 98.66% | 0% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| A54.CMAG_2_CGC29 | CGCFAM_00011 | Yes | 11 | 3 | |
| A54.CMAG_2_CGC27 | CGCFAM_00055 | Yes | 9 | 3 | |
| A54.CMAG_2_CGC18 | CGCFAM_00083 | Yes | 3 | 1 | beta-glucan |
| A54.CMAG_2_CGC28 | CGCFAM_00085 | Yes | 4 | 2 | |
| A54.CMAG_2_CGC2 | CGCFAM_00317 | Yes | 9 | 3 | |
| A54.CMAG_2_CGC6 | CGCFAM_00766 | Yes | 5 | 1 | |
| A54.CMAG_2_CGC19 | CGCFAM_00943 | Yes | 3 | 1 | |
| A54.CMAG_2_CGC23 | CGCFAM_00952 | Yes | 3 | 1 | |
| A54.CMAG_2_CGC26 | CGCFAM_01097 | Yes | 5 | 2 | |
| A54.CMAG_2_CGC31 | CGCFAM_01932 | Yes | 4 | 1 | |
| A54.CMAG_2_CGC13 | CGCFAM_04441 | Yes | 4 | 1 | |
| A54.CMAG_2_CGC17 | CGCFAM_06786 | Yes | 6 | 1 |
Top CAZyme Families