Cluster: A54.CMAG_2_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A54.CMAG_2
- CGC Family ID: CGCFAM_06786
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A54_contig_360 | A54_contig_360_1577 | 1614876 | 1615844 | - | GT2 |
| NULL(UNKNOWN) | A54_contig_360 | A54_contig_360_1578 | 1616234 | 1616638 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A54_contig_360 | A54_contig_360_1579 | 1616642 | 1617484 | + | 1.E.12.1.3 |
| pfam | A54_contig_360 | A54_contig_360_1580 | 1617490 | 1618104 | + | DnaJ |
| pfam | A54_contig_360 | A54_contig_360_1581 | 1618201 | 1619136 | + | PP2C | PP2C_2 |
| TC | A54_contig_360 | A54_contig_360_1582 | 1619186 | 1621792 | - | 3.A.9.1.2 |
Gene ID: A54_contig_360_1577
Type: CAZyme
Location: 1614876 - 1615844 (-)
Type: CAZyme
Location: 1614876 - 1615844 (-)
Gene ID: A54_contig_360_1578
Type:
Location: 1616234 - 1616638 (+)
Type:
Location: 1616234 - 1616638 (+)
Gene ID: A54_contig_360_1579
Type: TC
Location: 1616642 - 1617484 (+)
Type: TC
Location: 1616642 - 1617484 (+)
Gene ID: A54_contig_360_1580
Type: pfam
Location: 1617490 - 1618104 (+)
Type: pfam
Location: 1617490 - 1618104 (+)
Gene ID: A54_contig_360_1581
Type: pfam
Location: 1618201 - 1619136 (+)
Type: pfam
Location: 1618201 - 1619136 (+)
Gene ID: A54_contig_360_1582
Type: TC
Location: 1619186 - 1621792 (-)
Type: TC
Location: 1619186 - 1621792 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000437255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.