Cluster: A54.CMAG_2_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A54.CMAG_2
- CGC Family ID: CGCFAM_04441
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A54_contig_360 | A54_contig_360_1379 | 1383718 | 1384095 | + | CBM4 |
| pfam | A54_contig_360 | A54_contig_360_1380 | 1384441 | 1385904 | + | UPF0020 | N6_Mtase | Eco57I | HsdM_N |
| pfam | A54_contig_360 | A54_contig_360_1381 | 1385949 | 1387049 | + | Methylase_S | Methylase_S |
| TC | A54_contig_360 | A54_contig_360_1382 | 1387072 | 1390383 | + | 3.A.17.1.1 |
Gene ID: A54_contig_360_1379
Type: CAZyme
Location: 1383718 - 1384095 (+)
Type: CAZyme
Location: 1383718 - 1384095 (+)
Gene ID: A54_contig_360_1380
Type: pfam
Location: 1384441 - 1385904 (+)
Type: pfam
Location: 1384441 - 1385904 (+)
Gene ID: A54_contig_360_1381
Type: pfam
Location: 1385949 - 1387049 (+)
Type: pfam
Location: 1385949 - 1387049 (+)
Gene ID: A54_contig_360_1382
Type: TC
Location: 1387072 - 1390383 (+)
Type: TC
Location: 1387072 - 1390383 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000437255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.