Cluster: A54.CMAG_2_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: A54.CMAG_2
- CGC Family ID: CGCFAM_00083
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A54_contig_360 | A54_contig_360_1595 | 1635485 | 1635850 | + | 9.B.55.2.2 |
| TF | A54_contig_360 | A54_contig_360_1596 | 1635859 | 1636719 | - | HTH_AraC |
| CAZyme | A54_contig_360 | A54_contig_360_1597 | 1636890 | 1639904 | + | GH2 |
Gene ID: A54_contig_360_1595
Type: TC
Location: 1635485 - 1635850 (+)
Type: TC
Location: 1635485 - 1635850 (+)
Gene ID: A54_contig_360_1596
Type: TF
Location: 1635859 - 1636719 (-)
Type: TF
Location: 1635859 - 1636719 (-)
Gene ID: A54_contig_360_1597
Type: CAZyme
Location: 1636890 - 1639904 (+)
Type: CAZyme
Location: 1636890 - 1639904 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000437255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.