Cluster: A54.CMAG_2_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: A54.CMAG_2
- CGC Family ID: CGCFAM_00085
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A54_contig_360 | A54_contig_360_2399 | 2575000 | 2577636 | + | 4.A.2.1.17 |
| NULL(UNKNOWN) | A54_contig_360 | A54_contig_360_2400 | 2577861 | 2578370 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A54_contig_360 | A54_contig_360_2401 | 2578367 | 2579446 | + | GT4 |
| CAZyme | A54_contig_360 | A54_contig_360_2402 | 2579443 | 2580642 | + | GT4 |
Gene ID: A54_contig_360_2399
Type: TC
Location: 2575000 - 2577636 (+)
Type: TC
Location: 2575000 - 2577636 (+)
Gene ID: A54_contig_360_2400
Type:
Location: 2577861 - 2578370 (+)
Type:
Location: 2577861 - 2578370 (+)
Gene ID: A54_contig_360_2401
Type: CAZyme
Location: 2578367 - 2579446 (+)
Type: CAZyme
Location: 2578367 - 2579446 (+)
Gene ID: A54_contig_360_2402
Type: CAZyme
Location: 2579443 - 2580642 (+)
Type: CAZyme
Location: 2579443 - 2580642 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000437255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.