Cluster: A54.CMAG_2_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: A54.CMAG_2
- CGC Family ID: CGCFAM_01097
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A54_contig_360 | A54_contig_360_2248 | 2421903 | 2423765 | - | 3.A.3.6.10 |
| STP | A54_contig_360 | A54_contig_360_2249 | 2423795 | 2424013 | - | HMA |
| pfam | A54_contig_360 | A54_contig_360_2250 | 2424302 | 2424880 | - | DUF3267 |
| CAZyme | A54_contig_360 | A54_contig_360_2251 | 2424916 | 2426586 | - | CBM35 | GH26 |
| CAZyme | A54_contig_360 | A54_contig_360_2252 | 2426602 | 2428923 | - | GH95 |
Gene ID: A54_contig_360_2248
Type: TC
Location: 2421903 - 2423765 (-)
Type: TC
Location: 2421903 - 2423765 (-)
Gene ID: A54_contig_360_2249
Type: STP
Location: 2423795 - 2424013 (-)
Type: STP
Location: 2423795 - 2424013 (-)
Gene ID: A54_contig_360_2250
Type: pfam
Location: 2424302 - 2424880 (-)
Type: pfam
Location: 2424302 - 2424880 (-)
Gene ID: A54_contig_360_2251
Type: CAZyme
Location: 2424916 - 2426586 (-)
Type: CAZyme
Location: 2424916 - 2426586 (-)
Gene ID: A54_contig_360_2252
Type: CAZyme
Location: 2426602 - 2428923 (-)
Type: CAZyme
Location: 2426602 - 2428923 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000437255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.