Cluster: A54.CMAG_2_CGC31
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A54.CMAG_2
- CGC Family ID: CGCFAM_01932
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A54_contig_360 | A54_contig_360_2587 | 2793339 | 2793920 | - | 3.A.1.25.5 |
| NULL(UNKNOWN) | A54_contig_360 | A54_contig_360_2588 | 2794430 | 2794777 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | A54_contig_360 | A54_contig_360_2589 | 2795024 | 2795614 | + | HD |
| CAZyme | A54_contig_360 | A54_contig_360_2590 | 2795684 | 2797270 | + | GH13_20 |
Gene ID: A54_contig_360_2587
Type: TC
Location: 2793339 - 2793920 (-)
Type: TC
Location: 2793339 - 2793920 (-)
Gene ID: A54_contig_360_2588
Type:
Location: 2794430 - 2794777 (+)
Type:
Location: 2794430 - 2794777 (+)
Gene ID: A54_contig_360_2589
Type: STP
Location: 2795024 - 2795614 (+)
Type: STP
Location: 2795024 - 2795614 (+)
Gene ID: A54_contig_360_2590
Type: CAZyme
Location: 2795684 - 2797270 (+)
Type: CAZyme
Location: 2795684 - 2797270 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000437255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.