Cluster: A54.CMAG_2_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A54.CMAG_2
- CGC Family ID: CGCFAM_00766
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A54_contig_360 | A54_contig_360_310 | 338608 | 340011 | - | 2.A.50.2.1 |
| TC | A54_contig_360 | A54_contig_360_311 | 340365 | 341351 | - | 8.A.21.2.2 |
| pfam | A54_contig_360 | A54_contig_360_312 | 341358 | 341831 | - | NfeD |
| pfam | A54_contig_360 | A54_contig_360_313 | 341944 | 343062 | - | UPF0020 | THUMP | RlmL_1st |
| CAZyme | A54_contig_360 | A54_contig_360_314 | 343086 | 345614 | - | GT51 |
Gene ID: A54_contig_360_310
Type: TC
Location: 338608 - 340011 (-)
Type: TC
Location: 338608 - 340011 (-)
Gene ID: A54_contig_360_311
Type: TC
Location: 340365 - 341351 (-)
Type: TC
Location: 340365 - 341351 (-)
Gene ID: A54_contig_360_312
Type: pfam
Location: 341358 - 341831 (-)
Type: pfam
Location: 341358 - 341831 (-)
Gene ID: A54_contig_360_313
Type: pfam
Location: 341944 - 343062 (-)
Type: pfam
Location: 341944 - 343062 (-)
Gene ID: A54_contig_360_314
Type: CAZyme
Location: 343086 - 345614 (-)
Type: CAZyme
Location: 343086 - 345614 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000437255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.