CGCs
Total: 123241 Gene Clusters| Cluster ID ↓ | CGC Family | Total Gene Count | CAZyme Gene Count | Substrate | CAZymes | Continent |
|---|---|---|---|---|---|---|
| BrooksB_2017_SRR5405658_bin.3_CGC3 | — | 3 | 1 | — |
GT28
|
North America |
| BrooksB_2017_SRR5405658_bin.3_CGC21 | CGCFAM_01683 | 5 | 1 | — |
GT4
|
North America |
| BrooksB_2017_SRR5405658_bin.3_CGC20 | CGCFAM_00041 | 5 | 2 | — |
GH105
Pectin, Pectin (rhamnogalacturonan i), Ulvan
GH28
Xylogalacturonan (pectin), Galacturonan (pectin), Rhamnogalacturonan (pectin), Pectin (rhamnogalacturonan i)
|
North America |
| BrooksB_2017_SRR5405658_bin.3_CGC2 | CGCFAM_04353 | 3 | 1 | — |
CE4
Chitooligosaccharides, Chitin, Peptidoglycan, Acetylxylan
|
North America |
| BrooksB_2017_SRR5405658_bin.3_CGC19 | CGCFAM_00056 | 4 | 1 | — |
GT2
|
North America |
| BrooksB_2017_SRR5405658_bin.3_CGC17 | CGCFAM_02149 | 7 | 1 | — |
CE4
Chitooligosaccharides, Chitin, Peptidoglycan, Acetylxylan
|
North America |
| BrooksB_2017_SRR5405658_bin.3_CGC16 | CGCFAM_01706 | 12 | 1 | — |
GH109
Mucin-type o-glycans
|
North America |
| BrooksB_2017_SRR5405658_bin.3_CGC15 | CGCFAM_02148 | 5 | 1 | — |
CE4
Chitooligosaccharides, Chitin, Peptidoglycan, Acetylxylan
|
North America |
| BrooksB_2017_SRR5405658_bin.3_CGC14 | CGCFAM_05176 | 9 | 1 | — |
GH24
Peptidoglycan
|
North America |
| BrooksB_2017_SRR5405658_bin.3_CGC13 | CGCFAM_05175 | 3 | 1 | — |
GH33
Sialic acid, Sialic acid (o-glycan, n-glycan, mucin, host glycan), Pectin (rhamnogalacturonan ii), lipopolysaccharides (bacteria)
|
North America |
| BrooksB_2017_SRR5405658_bin.3_CGC12 | — | 3 | 1 | — |
AA7
Glucooligosaccharide, Cellooligosaccharide, Chitooligosaccharide
|
North America |
| BrooksB_2017_SRR5405658_bin.3_CGC11 | CGCFAM_00749 | 6 | 1 | — |
CE4
Chitooligosaccharides, Chitin, Peptidoglycan, Acetylxylan
|
North America |
| BrooksB_2017_SRR5405658_bin.3_CGC10 | CGCFAM_07862 | 9 | 1 | — |
GH23
Chitin, Peptidoglycan
|
North America |
| BrooksB_2017_SRR5405658_bin.3_CGC1 | CGCFAM_03610 | 15 | 3 | — |
CBM50
Chitin or peptidoglycan
GH1
Strictosidine (monoterpene indole alkaloids), Beta-fucosides, Beta-galactoside, 6-phospho-beta-galactoside, Beta-glucan, Beta-glucoside, 6-phospho-beta-glucoside, Ceramide b-galactosidase, Beta-glucuronoside, Beta-mannoside, Glc-conjugated aba (plant), Raucaffricine (glucoalkaloid), Lactose in milk, phlorizin (polyphenols) in fruit, Rutin (polyphenol), Amygdalin (cyanogenic glycosides), Prunasin (cyanogenic glycosides), Vicianin (cyanogenic glycosides), Glucosinolates (sulfur-containing phytochemicals), Beta-primeverosides (tea plant phytochemicals), Daidzin and genistin, furcatin (polyphenol), Dimboa glucoside (polyphenol), Furostanol (polyphenol), Phlorizin (polyphenols) in fruit, Isoflavone, Rutin, beta-xyloside
GH94
Acholetin, Laminarin, 1, 2-beta-oligoglucan, Cellobiose, Cellobionic acid, Cellodextrin, 4-o-beta--glucosyl-galactose, Chitin
|
North America |
| BF385_bin.10_CGC4 | CGCFAM_00011 | 4 | 1 | — |
GT2
|
Africa |
| BF385_bin.10_CGC3 | CGCFAM_03327 | 5 | 3 | — |
GT2
GT4
|
Africa |
| BF385_bin.10_CGC2 | CGCFAM_00749 | 3 | 1 | — |
GH5
Arabinan, Arabinogalactan (bacteria), Arabinogalactan, Laminarin (algae), pustulan (fungi), Beta-1, 3-glucans (laminarin), Beta-glucan(contains both (1->3)- and (1->4)-bonds), Lichenin and cereal beta-glucan, Cellulose, beta-glucan, Beta-glycoside, Beta-mannan, Glucomannan, N-glycan, beta-mannan, Mannans, galactomannans and glucomannan, Cellulose and similar substrates, Chitin or peptidoglycan, Chitosan, Sterylglucoside (fungi), Glycosphingolipids, Fungus-specific glucosylceramide (glycolipid), Glycosphingolipid, galactolipids, Hesperidin, Naringenin (flavonoid) and tea aroma, Rutin (polyphenol), Arabinoxylans, Xylan, Xyloglucan
|
Africa |
| BF385_bin.10_CGC1 | CGCFAM_00386 | 5 | 1 | — |
GT51
|
Africa |
| BF382_bin.61_CGC9 | CGCFAM_00077 | 6 | 1 | — |
CE11
Biosynthesis of lipid a
|
Africa |
| BF382_bin.61_CGC8 | CGCFAM_00003 | 6 | 3 | — |
GT4
GT51
GT2
|
Africa |