Cluster: BrooksB_2017_SRR5405658_bin.3_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405658_bin.3
- CGC Family ID: CGCFAM_00749
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_216 | 253668 | 255419 | + | 3.A.1.135.5 |
| TC | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_217 | 255412 | 257349 | + | 3.A.1.135.5 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_218 | 257447 | 258196 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_219 | 258416 | 259525 | - | DUF218 |
| TC | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_220 | 259587 | 260777 | - | 9.B.34.1.2 |
| CAZyme | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_221 | 261356 | 262150 | - | CE4 |
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_216
Type: TC
Location: 253668 - 255419 (+)
Type: TC
Location: 253668 - 255419 (+)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_217
Type: TC
Location: 255412 - 257349 (+)
Type: TC
Location: 255412 - 257349 (+)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_218
Type:
Location: 257447 - 258196 (-)
Type:
Location: 257447 - 258196 (-)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_219
Type: pfam
Location: 258416 - 259525 (-)
Type: pfam
Location: 258416 - 259525 (-)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_220
Type: TC
Location: 259587 - 260777 (-)
Type: TC
Location: 259587 - 260777 (-)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_221
Type: CAZyme
Location: 261356 - 262150 (-)
Type: CAZyme
Location: 261356 - 262150 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.