Cluster: BrooksB_2017_SRR5405658_bin.3_CGC10
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405658_bin.3
- CGC Family ID: CGCFAM_07862
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_123 | 142934 | 143722 | - | 2.A.5.5.2 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_124 | 143894 | 144007 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_125 | 144147 | 144659 | - | Ferritin |
| TC | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_126 | 144880 | 146109 | - | 8.A.59.4.2 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_127 | 146247 | 146423 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_128 | 146757 | 147551 | - | AP_endonuc_2 |
| TC | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_129 | 147894 | 150533 | + | 9.B.74.1.1 |
| TC | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_130 | 150530 | 152773 | + | 9.B.74.1.1 |
| CAZyme | BrooksB_2017_SRR5405658_bin.3_k141_10606 | BrooksB_2017_SRR5405658_bin.3_k141_10606_131 | 152863 | 153657 | + | GH23 |
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_123
Type: TC
Location: 142934 - 143722 (-)
Type: TC
Location: 142934 - 143722 (-)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_124
Type:
Location: 143894 - 144007 (+)
Type:
Location: 143894 - 144007 (+)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_125
Type: pfam
Location: 144147 - 144659 (-)
Type: pfam
Location: 144147 - 144659 (-)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_126
Type: TC
Location: 144880 - 146109 (-)
Type: TC
Location: 144880 - 146109 (-)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_127
Type:
Location: 146247 - 146423 (-)
Type:
Location: 146247 - 146423 (-)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_128
Type: pfam
Location: 146757 - 147551 (-)
Type: pfam
Location: 146757 - 147551 (-)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_129
Type: TC
Location: 147894 - 150533 (+)
Type: TC
Location: 147894 - 150533 (+)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_130
Type: TC
Location: 150530 - 152773 (+)
Type: TC
Location: 150530 - 152773 (+)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_10606_131
Type: CAZyme
Location: 152863 - 153657 (+)
Type: CAZyme
Location: 152863 - 153657 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.