Cluster: BrooksB_2017_SRR5405658_bin.3_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405658_bin.3
- CGC Family ID: CGCFAM_02148
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BrooksB_2017_SRR5405658_bin.3_k141_12095 | BrooksB_2017_SRR5405658_bin.3_k141_12095_191 | 192835 | 193710 | + | CE4 |
| pfam | BrooksB_2017_SRR5405658_bin.3_k141_12095 | BrooksB_2017_SRR5405658_bin.3_k141_12095_192 | 193774 | 194511 | + | Amidase_3 | SH3_4 | SH3_3 |
| NULL(UNKNOWN) | BrooksB_2017_SRR5405658_bin.3_k141_12095 | BrooksB_2017_SRR5405658_bin.3_k141_12095_193 | 194648 | 196393 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | BrooksB_2017_SRR5405658_bin.3_k141_12095 | BrooksB_2017_SRR5405658_bin.3_k141_12095_194 | 196536 | 198911 | - | 3.A.3.23.2 |
| TC | BrooksB_2017_SRR5405658_bin.3_k141_12095 | BrooksB_2017_SRR5405658_bin.3_k141_12095_195 | 199103 | 200422 | + | 9.B.67.1.2 |
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_12095_191
Type: CAZyme
Location: 192835 - 193710 (+)
Type: CAZyme
Location: 192835 - 193710 (+)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_12095_192
Type: pfam
Location: 193774 - 194511 (+)
Type: pfam
Location: 193774 - 194511 (+)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_12095_193
Type:
Location: 194648 - 196393 (-)
Type:
Location: 194648 - 196393 (-)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_12095_194
Type: TC
Location: 196536 - 198911 (-)
Type: TC
Location: 196536 - 198911 (-)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_12095_195
Type: TC
Location: 199103 - 200422 (+)
Type: TC
Location: 199103 - 200422 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.