Cluster: BrooksB_2017_SRR5405658_bin.3_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: BrooksB_2017_SRR5405658_bin.3
- CGC Family ID: CGCFAM_00056
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BrooksB_2017_SRR5405658_bin.3_k141_13981 | BrooksB_2017_SRR5405658_bin.3_k141_13981_186 | 168331 | 168882 | - | 3.A.1.26.7 |
| STP | BrooksB_2017_SRR5405658_bin.3_k141_13981 | BrooksB_2017_SRR5405658_bin.3_k141_13981_187 | 169376 | 171529 | - | HATPase_c | HisKA |
| TF | BrooksB_2017_SRR5405658_bin.3_k141_13981 | BrooksB_2017_SRR5405658_bin.3_k141_13981_188 | 171495 | 172202 | - | Trans_reg_C |
| CAZyme | BrooksB_2017_SRR5405658_bin.3_k141_13981 | BrooksB_2017_SRR5405658_bin.3_k141_13981_189 | 172760 | 173707 | + | GT2 |
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_13981_186
Type: TC
Location: 168331 - 168882 (-)
Type: TC
Location: 168331 - 168882 (-)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_13981_187
Type: STP
Location: 169376 - 171529 (-)
Type: STP
Location: 169376 - 171529 (-)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_13981_188
Type: TF
Location: 171495 - 172202 (-)
Type: TF
Location: 171495 - 172202 (-)
Gene ID: BrooksB_2017_SRR5405658_bin.3_k141_13981_189
Type: CAZyme
Location: 172760 - 173707 (+)
Type: CAZyme
Location: 172760 - 173707 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.