CGCs
Total: 123241 Gene Clusters| Cluster ID ↑ | CGC Family | Total Gene Count | CAZyme Gene Count | Substrate | CAZymes | Continent |
|---|---|---|---|---|---|---|
| Rep_490_CGC96 | CGCFAM_01248 | 10 | 6 | pectin |
GH106
Pectin (rhamnogalacturonan i), Pectin (rhamnogalacturonan ii)
CE20
Xyloglucan
GH139
Pectin (rhamnogalacturonan ii)
GH2
Galactomannan (fungi), Arabinan, Beta-galactoside, Beta-glucoside, Beta-glucuronoside, Beta-mannoside, Chitosan or chitosan oligosaccharides (nonacetylated chitin), N-glycan (plant), Pectin (rhamnogalacturonan ii), Beta-xyloside
PL1
Pectin, Homogalacturonan(de-esterified pectin)
PL29
|
NA |
| Rep_490_CGC97 | — | 4 | 1 | — |
CBM50
Chitin or peptidoglycan
|
NA |
| Rep_490_CGC98 | — | 3 | 1 | — |
GT4
|
NA |
| Rep_490_CGC99 | — | 4 | 1 | — |
CBM50
Chitin or peptidoglycan
|
NA |
| Rep_499_CGC1 | — | 3 | 1 | — |
GH16
Agarose, Arabinogalactan proteins, Beta-1, 3-glucan, 3-glucan (fungi, algae, plant), 3-1, 4-glucan (laminarin, lichenin and cereal d-glucans), Carrageenan, Chitin, Exopolysaccharides (bacteria), Mucin-type o-glycans, Keratan sulfate (host glycan), Hyaluronate (glycosaminoglycan of host glycan), Porphyran (red algal beta-galactose-sulfate), Xyloglucan (plant), Xyloglucan
|
NA |
| Rep_499_CGC10 | CGCFAM_00647 | 10 | 4 | — |
GH105
Pectin, Pectin (rhamnogalacturonan i), Ulvan
GH88
Sulfated glycosaminoglycans
PL8
Alginate, Hyaluronan, Glycosaminoglycans(host glycan), Heparin and heparan sulfate(host glycan), Xanthan
|
NA |
| Rep_499_CGC11 | CGCFAM_00940 | 5 | 2 | — |
GT83
GT2
|
NA |
| Rep_499_CGC12 | — | 3 | 1 | — |
GH18
Chitooligosaccharides (symbiotic nitrogen-fixing bacteria), Chitin, N-glycan (host glycan), Peptidoglycan
|
NA |
| Rep_499_CGC13 | — | 17 | 7 | — |
GH36
Alpha-galactoside (galactose oligosaccharides, galactomannans and galactolipid), Acetylgalactosamine (human blood group a and b, mucin glycoproteins), Raffinose/stachyose oligosaccharides (plant seeds), Raffinose oligosaccharides
GH43
Arabinan, arabinoxylan, Beta-1, 3-galactan, arabinogalactan, Beta-galactofuranoside, 3-xylan (algae), Xylan, Arabinoxylan
CBM32
Galactose, lactose, lacnac
GH109
Mucin-type o-glycans
GH130
Mannooligosaccharides, Beta-mannan
GH31
Alpha-galactoside, Alpha-mannoside, Sulfoquinovoside (plant sulfolipid), Human blood group a, mucin, host glycan, Mannosyl-oligosaccharide, Glycogen and starch, Starch, Sucrose, Xyloglucan (plant)
|
NA |
| Rep_499_CGC14 | — | 9 | 3 | — |
PL6
Alginate, Dermatan sulfate(host glycan)
PL17
Alginate
PL38
Alginate, Beta-glucuronan; alginate
|
NA |
| Rep_499_CGC15 | CGCFAM_00025 | 16 | 5 | pectin alpha-glucan |
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
GH97
Alpha-glucose residue, Alpha-galactoside, alpha-fucoside, Starch
GH2
Galactomannan (fungi), Arabinan, Beta-galactoside, Beta-glucoside, Beta-glucuronoside, Beta-mannoside, Chitosan or chitosan oligosaccharides (nonacetylated chitin), N-glycan (plant), Pectin (rhamnogalacturonan ii), Beta-xyloside
GT2
|
NA |
| Rep_499_CGC16 | — | 4 | 1 | — |
GH29
Human milk oligosaccharides, mucin, host glycan
|
NA |
| Rep_499_CGC18 | — | 8 | 4 | — |
PL30
Hyaluronate(host glycan)
GH88
Sulfated glycosaminoglycans
GH117
Agarobiose, Neoagarose (marine algae)
PL8
Alginate, Hyaluronan, Glycosaminoglycans(host glycan), Heparin and heparan sulfate(host glycan), Xanthan
|
NA |
| Rep_499_CGC19 | CGCFAM_00253 | 8 | 4 | — |
GT2
GT4
|
NA |
| Rep_499_CGC2 | — | 6 | 4 | — |
GH95
Plant pectic polysaccharide, xylan, Alpha1, 2-l-fucosidase sugar, Alpha-l-fucoside
GH3
Arabinan, arabinoxylan, Avenacin, Beta-1, 3-1, 4-glucan (laminarin, lichenin and cereal d-glucans), Beta-glucan, 3-glucan (laminarin, Cellodextrin (beta-1, 3-glucan), Chitin, peptidoglycan, Glycosphingolipid (host glycan), Peptidoglycan, Coniferin (glucoside of coniferyl alcohol), Protodioscin (plant steroidal saponin), Xylan, Xyloglucan (plant)
GH154
Arabinogalactan proteins
GH105
Pectin, Pectin (rhamnogalacturonan i), Ulvan
|
NA |
| Rep_499_CGC20 | CGCFAM_04409 | 8 | 5 | — |
GT4
GT94
GT2
|
NA |
| Rep_499_CGC21 | CGCFAM_00212 | 25 | 14 | arabinogalactan pectin |
PL1
Pectin, Homogalacturonan(de-esterified pectin)
GH43
Arabinan, arabinoxylan, Beta-1, 3-galactan, arabinogalactan, Beta-galactofuranoside, 3-xylan (algae), Xylan, Arabinoxylan
GH142
Pectin (rhamnogalacturonan ii)
GH143
Pectin (rhamnogalacturonan ii)
CBM67
L-rhamnose
GH78
Alpha-l-rhamnosidase in polyphenol (naringin, rutin, hesperidin), ulvan, pectin, arabinogalactan-protein, Rhamnogalacturonan
GH28
Xylogalacturonan (pectin), Galacturonan (pectin), Rhamnogalacturonan (pectin), Pectin (rhamnogalacturonan i)
CE19
Pectin
GH33
Sialic acid, Sialic acid (o-glycan, n-glycan, mucin, host glycan), Pectin (rhamnogalacturonan ii), lipopolysaccharides (bacteria)
GH140
Pectin (rhamnogalacturonan ii)
GH105
Pectin, Pectin (rhamnogalacturonan i), Ulvan
GH95
Plant pectic polysaccharide, xylan, Alpha1, 2-l-fucosidase sugar, Alpha-l-fucoside
GH18
Chitooligosaccharides (symbiotic nitrogen-fixing bacteria), Chitin, N-glycan (host glycan), Peptidoglycan
GH163
N-glycan (host glycan)
GH130
Mannooligosaccharides, Beta-mannan
GH92
Mannosyl-oligosaccharide, Host n-glycan
|
NA |
| Rep_499_CGC22 | — | 3 | 1 | — |
GH18
Chitooligosaccharides (symbiotic nitrogen-fixing bacteria), Chitin, N-glycan (host glycan), Peptidoglycan
|
NA |
| Rep_499_CGC23 | CGCFAM_06412 | 6 | 2 | — |
CE17
Acetylmannan
GH3
Arabinan, arabinoxylan, Avenacin, Beta-1, 3-1, 4-glucan (laminarin, lichenin and cereal d-glucans), Beta-glucan, 3-glucan (laminarin, Cellodextrin (beta-1, 3-glucan), Chitin, peptidoglycan, Glycosphingolipid (host glycan), Peptidoglycan, Coniferin (glucoside of coniferyl alcohol), Protodioscin (plant steroidal saponin), Xylan, Xyloglucan (plant)
|
NA |
| Rep_499_CGC24 | CGCFAM_00001 | 8 | 4 | pectin galactan beta-glucan xylan beta-mannan host glycan |
GH3
Arabinan, arabinoxylan, Avenacin, Beta-1, 3-1, 4-glucan (laminarin, lichenin and cereal d-glucans), Beta-glucan, 3-glucan (laminarin, Cellodextrin (beta-1, 3-glucan), Chitin, peptidoglycan, Glycosphingolipid (host glycan), Peptidoglycan, Coniferin (glucoside of coniferyl alcohol), Protodioscin (plant steroidal saponin), Xylan, Xyloglucan (plant)
GH127
Arabinogalactan proteins, Carrageenan (marine algae), Pectin (rhamnogalacturonan ii)
GH31
Alpha-galactoside, Alpha-mannoside, Sulfoquinovoside (plant sulfolipid), Human blood group a, mucin, host glycan, Mannosyl-oligosaccharide, Glycogen and starch, Starch, Sucrose, Xyloglucan (plant)
GH28
Xylogalacturonan (pectin), Galacturonan (pectin), Rhamnogalacturonan (pectin), Pectin (rhamnogalacturonan i)
|
NA |