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Cluster: Rep_499_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_499_c_16 Rep_499_c_16_31 59337 62519 + 1.B.14.6.1
TC Rep_499_c_16 Rep_499_c_16_32 62532 64052 + 8.A.46.1.5
pfam Rep_499_c_16 Rep_499_c_16_33 64073 65752 + TIG
CAZyme Rep_499_c_16 Rep_499_c_16_34 65759 68020 + PL6 | PL6_1
CAZyme Rep_499_c_16 Rep_499_c_16_35 68067 70274 + PL17 | PL17_2
pfam Rep_499_c_16 Rep_499_c_16_36 70298 70642 + Cupin_2 | Cupin_7
TC Rep_499_c_16 Rep_499_c_16_37 70647 72113 + 2.A.1.14.25
pfam Rep_499_c_16 Rep_499_c_16_38 72138 72890 + adh_short | KR | adh_short_C2 | SDR
CAZyme Rep_499_c_16 Rep_499_c_16_39 73011 74213 + PL38
Gene ID: Rep_499_c_16_31
Type: TC
Location: 59337 - 62519 (+)
Gene ID: Rep_499_c_16_32
Type: TC
Location: 62532 - 64052 (+)
Gene ID: Rep_499_c_16_33
Type: pfam
Location: 64073 - 65752 (+)
Gene ID: Rep_499_c_16_34
Type: CAZyme
Location: 65759 - 68020 (+)
Gene ID: Rep_499_c_16_35
Type: CAZyme
Location: 68067 - 70274 (+)
Gene ID: Rep_499_c_16_36
Type: pfam
Location: 70298 - 70642 (+)
Gene ID: Rep_499_c_16_37
Type: TC
Location: 70647 - 72113 (+)
Gene ID: Rep_499_c_16_38
Type: pfam
Location: 72138 - 72890 (+)
Gene ID: Rep_499_c_16_39
Type: CAZyme
Location: 73011 - 74213 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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