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Cluster: Rep_499_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_499_c_13 Rep_499_c_13_48 73842 76229 + GH105
TC Rep_499_c_13 Rep_499_c_13_49 76434 79577 + 1.B.14.6.1
pfam Rep_499_c_13 Rep_499_c_13_50 79599 81422 + SusD_RagB
TC Rep_499_c_13 Rep_499_c_13_51 81465 84260 + 1.B.14.6.1
pfam Rep_499_c_13 Rep_499_c_13_52 84274 85944 + SusD_RagB | SusD-like_3
CAZyme Rep_499_c_13 Rep_499_c_13_53 85969 87198 + GH88
sulfatase Rep_499_c_13 Rep_499_c_13_54 87217 88773 + S1_15
CAZyme Rep_499_c_13 Rep_499_c_13_55 88943 90145 + GH88
sulfatase Rep_499_c_13 Rep_499_c_13_56 90273 91823 + S1_27
CAZyme Rep_499_c_13 Rep_499_c_13_57 91865 94726 + PL8_2
Gene ID: Rep_499_c_13_48
Type: CAZyme
Location: 73842 - 76229 (+)
Gene ID: Rep_499_c_13_49
Type: TC
Location: 76434 - 79577 (+)
Gene ID: Rep_499_c_13_50
Type: pfam
Location: 79599 - 81422 (+)
Gene ID: Rep_499_c_13_51
Type: TC
Location: 81465 - 84260 (+)
Gene ID: Rep_499_c_13_52
Type: pfam
Location: 84274 - 85944 (+)
Gene ID: Rep_499_c_13_53
Type: CAZyme
Location: 85969 - 87198 (+)
Gene ID: Rep_499_c_13_54
Type: sulfatase
Location: 87217 - 88773 (+)
Gene ID: Rep_499_c_13_55
Type: CAZyme
Location: 88943 - 90145 (+)
Gene ID: Rep_499_c_13_56
Type: sulfatase
Location: 90273 - 91823 (+)
Gene ID: Rep_499_c_13_57
Type: CAZyme
Location: 91865 - 94726 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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